SE1820134

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10462
  • Glycine max
  • SE1820134
  • Mutator
  • M30
  • Gm19:8754643-8754855
  • CATCTAGAT
  • ATCTAGATGGTTGTTACTTCCTGCACCTCCAAGTTGCTTCCTGCAGCCTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
C          -     AC   C         -          CT   G     ----------TC      TTTTTTTTTT  - TTCCAAATTGGTCATTCTAAAGCCAAAAAAGG
 ATCTAGATGG TTGTT  TTC TGCACCTCC AAGTTGCTTC  GCA CCTTT            AGAATG          AC C                                
 |||||||||| |||||  ||| ||||||||| ||||||||||  ||| |||||            ||||||          || |                                 
 TAGATCTACC GATAA  AAG ACGTGGAGG TTCAACGAAG  TGT GGAGA            CCTTAC          GT A                                
           C     CT   T         G          AT   -     CAAAACCGAAAA      --------CA  T AGTTTTACATTTGAATGTAATGTTTTATGTAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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