SE1820146

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10474
  • Glycine max
  • SE1820146
  • Mutator
  • M31
  • Gm18:59141481-59141679
  • ATAAATTAA
  • TAAATTAAGAG

Secondary structure and sequence

TSD    TIR
5'



3' 
A   A   A   AAATCA     A   ACTCCTTAACATACTAATTTGAACACACCCTCTACTATTAGCTGAAACTTATTGAAAATCTCAAAATTTCGTG
 TAA TTA GAG      TAGTA AAG                                                                         
 ||| ||| |||      ||||| |||                                                                          
 ATT AAT CTC      ATCAT TGT                                                                         
A   A   A   CTCACG     -   GTGAGATGATAACCAACCTTAAATAATTTTTAGGGTTTTAATATTCACCCCTAGTAATTTAAACTTCACTCTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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