SE1820164

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10492
  • Glycine max
  • SE1820164
  • Mutator
  • M8
  • Gm08:42942091-42942414
  • TAAAAACAA
  • AGGCTTAATTACTAATTTGATCCCTAAATTATTTAAAATGGCTCAAGTTGGTCTCTAAATTTCCAAACACTCCAATTAGATCCTCTAATTTTTAAAAAGGCTTCAATCAAGACCTTTTCGTCAAATTGAAACTGAAACCGTTAATGA

Secondary structure and sequence

TSD    TIR
5'



3' 
TAAAAACA                   A             T       -C    G                C               A                  G         AA A        T -     ---------GAA   GAA  CGT      AAA
        AGGCTTAATTACTAATTTG TCCCTAAATTATT AAAATGG  TCAA TTGGTCTCTAAATTTC AAACACTCCAATTAG TCCTCTAATTTTTAAAAA GCTTCAATC  G CCTTTTCG C AAATT            ACT   AC   TAATGA   
        ||||||||||||||||||| ||||||||||||| |||||||  |||| |||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||  | |||||||| | |||||            |||   ||   ||||||    
        TCCGAATTAATGATTAAAC AGGGATTTAATAA TTTTACC  AGTT AACCAGGGATTTAAAG TTTGTGAGGTTAATC AGGAGATTAAAAATTTTT CGAAGTTAG  C GGAAAGGT G TTTAA            TGA   TG   ATTACT   
CACAAAAA                   C             T       TA    A                A               C                  A         CC A        - A     GACCGCTAAAAA   --A  TTT      GCC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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