SE1820166

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10494
  • Glycine max
  • SE1820166
  • Mutator
  • M38
  • Gm12:14352209-14352389
  • TAAATTAAA
  • AGAGAAGTGATACACTTACAATAATTTGTATAAC

Secondary structure and sequence

TSD    TIR
5'



3' 
TAAATTAA        G    ACT        TT        ----------------------A   T   CAACATTATATTTGTGTTTATCTTTCTCCT
        AGAGAAGT ATAC   TACAATAA  TGTATAAC                       ATA ATA                              
        |||||||| ||||   ||||||||  ||||||||                       ||| |||                               
        TCTCTTTA TATG   ATGTTGTT  ATATATTG                       TAA ACT                              
AAATTAAA        A    AAC        TT        ATTCTCTCTCTTTCCCTTCTATT   -   TAAAGTTTATGTTATTTATTATCTCATTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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