SE1820179

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10507
  • Glycine max
  • SE1820179
  • Mutator
  • M1
  • Gm04:18316811-18317202
  • TACTATTTT
  • GGGTGTTGCTAGGTGCACCTAGCATTATTGCTGGTGCACCCA

Secondary structure and sequence

TSD    TIR
5'



3' 
TACTATTTT        C                                 --      AAGGTGAAATGATGAAAATACCCTTGATCCATAAGTATTTAAATTGATCTGTAAAAGTCTTACGGATCAACTTGATCCGTAAGCTTTTTACAGTTCAACTTGATCCGTAAGTTTTTTATGGATCAAGTTGATTCGTAT
         GGGTGTTG TAGGTGCACCTAGCATTATTGCTGGTGCACCCA  GTACTT                                                                                                                                          
         |||||||| |||||||||||||||||||||||||||||||||  ||||||                                                                                                                                           
         CCCACAAC ATCCACGTGGGTCGTAATAACGATCACGTGGGT  TAAAAT                                                                                                                                          
TTTTATCAT        A                                 TG      AATGTTATGGTTTTAATAGGGATACGAAAAAAGCGTAAACACTACCCACACACACTTCCACTAGGCATTTAGTATGCCTAGTTCAACTAGGCATTCCAACTATGCCTAGTTGAACTAGGCATTCAGAAAATGCCTTGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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