SE1850195

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10523
  • Glycine max
  • SE1850195
  • PIF/harbinger
  • To2
  • Gm18:52342555-52342711
  • TTA
  • ATAGTGTGTTTGGATAAGA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT              TA   CCTAACAATCAATTCTATTCCTCAAAA         -----T    TAAAAAAAGTGGAAGCAGCTATTTGTT
  ATAGTGTGTTTGGA  AGA                           TCATGGTGG      GCTT                           
  ||||||||||||||  |||                           |||||||||      ||||                            
  TATCACACAAACCT  TCT                           AGTACCACT      TGGT                           
AT              TA   --------------------------A         CTTTAT    TAATGAAAAATTACCACTTCCGTTTCG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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