SE1820210

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10538
  • Glycine max
  • SE1820210
  • Mutator
  • M43
  • Gm18:25755866-25756426
  • TATATATAA
  • A

Secondary structure and sequence

TSD    TIR
5'



3' 
TATATATA        TTTAATTTAAAAATATTGTTAGCATAAAATTATTTTACACTGTTATTAAAAAACTTTTTCTATTAATTGAGTCTTTGAGTTTTTATTTACATTTTAACCGGGTCCTCACATCTAATTATTGTCATAAAAAATAATCACATATGATATACCTATTTAGAGGTGTGGACAATGGATTGGTGCATTCGGAATGTGCTATAAGCACAACTAAGACAAATGTAAGAGAATTTTGCAAAGTTTCAACCGTTGCATGTTAACTCAATCCAAGTA
        ATTTTTAA                                                                                                                                                                                                                                                                           
        ||||||||                                                                                                                                                                                                                                                                           T
        TTTATATC                                                                                                                                                                                                                                                                           
      AA        CAATTTTACTAAACTCCCAGAGGTATGAAAATCGTTTAAAAATTAATTCAGGGATATGAAAAAAGAAAATTAAACCAGGGATATGAAAATATAAAAATCAACTCAGAAGGGGTTGATCAACAACAATATTTTTTAATGTACGTTAGAGAATTAATCTCCCCATCTGTTACCTGATTATGAAGATTTCACACAACATTCCACTCCCCAAAAAAAACCTCTCAAAGTTGAAAATCGTGTCAGTTTGTTAACTTTCTACGAACACTTTCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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