SE1820215

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10543
  • Glycine max
  • SE1820215
  • Mutator
  • M10
  • Gm19:36766584-36766918
  • TAATCAGAT
  • ATCAGATGGGACATGCTAGGTGCACCCAGCAACATTGTTGGTGCACTCAACAATTAAGTGAATGGATAAAATTGTCCTTGCGTTAAAAAAAATAATTCTTCTTGCGGAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TA   A   --        C                        G                                                        C     G      ------      TTTCCGGAAGAATAATTTGTGTTCTACCGAAAAAACCTTCTTTCAG
  ATC GAT  GGGACATG TAGGTGCACCCAGCAACATTGTTG TGCACTCAACAATTAAGTGAATGGATAAAATTGTCCTTGCGTTAAAAAAAATAATT TTCTT CGGAAA      AAGGTT                                              
  ||| |||  |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||      ||||||                                              A
  TAG CTA  CCCTGTAC ATCCACGTGGGTCGTTGTAACGAC ACGTGGGTTGTTAATTCACTTACCTGTTTTAACAGGAACGTAATTTTTTTTATTAA AAGAA GCCTTT      CCTTCT                                              
     A   AT        A                        G                                                        A     G      CGACAA      TAGAAGAAGGCCTTCTTTCAAGAAAACTATCTTGTGTTTAATAAGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3