SE1820251

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10579
  • Glycine max
  • SE1820251
  • Mutator
  • M47
  • Gm11:7143998-7144197
  • ATTTTGTTA
  • GAG

Secondary structure and sequence

TSD    TIR
5'



3' 
ATTTTGTTA   TTTAACGATT                   CT         T               ATTATC    GAATTATTTTAAGATAATTATTTT
         GAG          ATGTACTGACGGTGTAAAA  GTTTTACAT GTCATCCAATCATAA      GTTT                        
         |||          |||||||||||||||||||  ||||||||| |||||||||||||||      ||||                        A
         CTC          TATGTGATTGTCATATTTT  CAAAATGTG TAGTAGGTTAGTGTT      GTAT                        
ATTGTTTTA   TTTTTTCCAT                   -T         T               ----AG    TACATACTATTCAAACAACTGAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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