SE3120005

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10602
  • Fragaria vesca
  • SE3120005
  • Mutator
  • FrvM2
  • LG6:3958515-3958751
  • TATACTCNG
  • ACTGTTGGAGTAATTATTCTCTGTACCCGGAACACTAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TATACTCNGTCATNCTNNCCT  T  T    T       CTC                 GTAGCA    CA   GTTGTACTCGGCCAATTATATAACTCAGATTTATGTGGAGACCAACACGGGGTGGAAAAAAAAAGAA
                     AC GT GGAG AATTATT   TGTACCCGGAACACTAT      CTGT  GGC                                                                   
                     || || |||| |||||||   |||||||||||||||||      ||||  |||                                                                    
                     TG CA CCTC TTAATAA   ACATGGGCCTTGTGGTG      GACA  AAT                                                                   
                   GT  T  T    T       TAA                 ------    -A   ATAAGGATAAATTAGAATAACCAGGTGCACAAAATAGAAATAAAGACTAATCACATAAATTAATGAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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