SE3120034

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10631
  • Fragaria vesca
  • SE3120034
  • Mutator
  • FrvM14
  • LG2:20697427-20697612
  • TATACTCNG
  • GGCTAACCTAGGGAGAGCTTCCAATGAGGAC

Secondary structure and sequence

TSD    TIR
5'



3' 
TATACTCNGTCATNCTNNC  C  A  TA                     AAAA    GATTTTCAAATGAACGGTTGGATCAAGGTTTTGACTTTTAATTGATATTTTCTAAT
                   GG TA CC  GGGAGAGCTTCCAATGAGGAC    TGAG                                                        
                   || || ||  |||||||||||||||||||||    ||||                                                         
                   CC AT GG  CCCTCTCGAAGGTTACTCCTG    GAAT                                                        
                 AT  A  C  --                     ----    ATTACTCCTGGTTCACTCCTGAAAGTTTACTTACCAACCTACTATACGTGTACCCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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