SE3120045

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10642
  • Fragaria vesca
  • SE3120045
  • Mutator
  • FrvM18
  • LG2:10929299-10929450
  • TATACTCNG
  • TGGACCACGAAAATTATACAGCGCAC

Secondary structure and sequence

TSD    TIR
5'



3' 
TATACTCNGTCATNCTNNCCT   A   -C  -AAA    A        CC  A    CCGCGCACCCGTCATCTCCACCGTCGATTTTGAAAAAGTC
                     TGG CCA  GA    TTAT CAGCGCAC  GG TGCG                                        
                     ||| |||  ||    |||| ||||||||  || ||||                                         
                     ACC GGT  CT    GATA GTCGCGTG  GC AGTA                                        
                        A   TC  CTCG    A        -A  -    GAGGTGGCAGCTAAAACTGCGCCTGAATTGTCTCGAAAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3