SE3120152

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10749
  • Fragaria vesca
  • SE3120152
  • Mutator
  • FrvM26
  • unanchored:1097998-1098336
  • TATACTCNG
  • T

Secondary structure and sequence

TSD    TIR
5'



3' 
      TATACTCNGTCATNCTNC     TTTTGAATTGAAATTTTTAGTCCTTTTGGTTTGAAGTTTACATATGTTTAGTCCTTATGGTTTCATTTTAATTTGAATGATCCTTAAAGTCACGATTTTTCCTTTCAGATAGTCCTCCCGTTAATTTTCTCTATTAAAATGCTGACGTGGCC
                        TTTCA                                                                                                                                                        
                        |||||                                                                                                                                                        G
                        ATCAG                                                                                                                                                        
TTTTACTTTCCCAATTTATAACAT     GGACACCAAACTTTAGTTGTATACAAGTCAGAAAGATCAAAGTAAAATTAGACTTACCAAGAATTTCAGTGCTAAAAGGAAGGTCTATCAGGAAGACAGTTAAAAGAGTCAATCTAACGACTGCACCGGCAATTTAAAAAATTACAAAAATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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