SE3120202

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10799
  • Fragaria vesca
  • SE3120202
  • Mutator
  • FrvM36
  • LG2:15793149-15793363
  • TATACTCNG
  • T

Secondary structure and sequence

TSD    TIR
5'



3' 
                    TA     NG   TNCTNCATCAATAGGGGGTTTGTCTATCATACCATATGGGCATATGGTATGACATACCTACATACCTATTGCAAATGTGTCTAATTGTATGGCAC
                      TACTC  TCA                                                                                               
                      |||||  |||                                                                                               A
                      TATGA  TAT                                                                                               
GGATAACTACCTTTTCAGATCA     --   ACCATATCGTACAGAATGTTTTACACACCGATAGTAACTAACTTTTTCGTTGATTTATTGGTACATTACTGATAAATGAGGAAGTTTTTGGGGAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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