SE3120238

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10835
  • Fragaria vesca
  • SE3120238
  • Mutator
  • FrvM4
  • LG3:7585760-7585924
  • TATACTCNG
  • TTCTACTATACATATATGTATAGCATATATCAAGCCGTGAGCCGTCCGATCGTCTTGA

Secondary structure and sequence

TSD    TIR
5'



3' 
TATACTCNGTCATNCTNCTTAACTAACGAACTT    A  A       A     A                               C    ATTTT
                                 TTCT CT TACATAT TGTAT GCATATATCAAGCCGTGAGCCGTCCGATCGT TTGA     
                                 |||| || ||||||| ||||| ||||||||||||||||||||||||||||||| ||||     G
                                 AGGA GA ATGTGTA ATATA TGTATGTAGTTCGGCACTCGGCAGGCTAGTA AATT     
         CAATCAATTCCCAAGCCGACGATT    C  C       A     C                               -    GTTAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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