SE3140245

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10842
  • Fragaria vesca
  • SE3140245
  • CACTA
  • FrvC4
  • LG6:32292816-32292999
  • TAT
  • CACAACAACAAAATGGAGCAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TAT           A         --------         AAAGACATAAAAAGTGTGGCATTTAGAGGTGTTACAATCCACATTTGTGTGGCAA
   CACAACAACAA ATGGAGCAA        ATGTCACAC                                                       
   ||||||||||| |||||||||        |||||||||                                                        
   GTGTTGTTGTT TACCTCGTT        AATCTCCAC                                                       
TAT           A         GTCCCGGA         AACGTAAAAAGCAATACACACCGTTCACTCCCATAATTACCTCTACTCCCCTTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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