SE3120261

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10858
  • Fragaria vesca
  • SE3120261
  • Mutator
  • FrvM2
  • LG6:34109142-34109378
  • TATACTCNG
  • T

Secondary structure and sequence

TSD    TIR
5'



3' 
            TA     N ---    N TNNCTTGTGTGACGAGTAATTATTCTCTGTACCCGGAACACCACGTGACACTGCCAAGTGTTGTACCCGGCTAATCATATAACTCAGATTCATGTGGGGACCAGCA
              TACTC G   TCAT C                                                                                                          
              ||||| |   |||| |                                                                                                           
              TAATA A   ACAT G                                                                                                          
CAGTGTGTTCCCTT     - TAA    A GCCTTGTGATAGACAAAATACAAGGGGAAATTAGAGTAACCAGGTGCACAAAATAGGAATAAAGAATAACCACATAAATTAATGAAAAGGAAAAAAAAGGAAGGGC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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