SE3150284

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10881
  • Fragaria vesca
  • SE3150284
  • PIF/harbinger
  • FrvP23
  • LG3:27705844-27705995
  • TAT
  • GCGACGAAAGAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TATACTCNGTCATNCTNNCTAA            TGCTTAT         TAAGAGTAACTTTTAGCGCCTAATTTTTACTCTTAAGCGACAAA
                      GCGACGAAAGAT       TTTGTCGCT                                            
                      ||||||||||||       |||||||||                                             
                      CGCTGTTTTCTG       GGACAGTTG                                            
                  AATA            CAAAACC         AAAATCGCGGATTAAAAATGAGAATTCGCTGCTTTCTACGAATA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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