SE3130334

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10931
  • Fragaria vesca
  • SE3130334
  • hAT
  • Frvh1
  • LG6:36434429-36434874
  • TTGACTTG
  • GCAGACCCG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTGACTT    A    TA     ATAGAGTCTTAAGAGTCGATGGACTCAGAGTCCATAACCTTAAGGGGCCCAAAATTTTCATTTCTCTTTGTGTGATTACATTAGTTTAGTTAAAAGCAATAAAAAATAATTAACATAATCTAATTAGGGTGGTGTTAGATTACAAAAGAGAAAAATAAATATAAAATCTTACCCATTATTACTATAATTAATTACTATTT
       GCAG CCCG  CCTGA                                                                                                                                                                                                        
       |||| ||||  |||||                                                                                                                                                                                                         
       TGTC GGGC  GGACT                                                                                                                                                                                                        
GTTCAGT    C    CT     CTAAAAGTCCGGACTGAGCTTGAAAATTTTAACCCGGGAGTTTTATATTATAAATAAGTTAAAATAAAAGAGTAAAATTCTTTGTGTGTTTTTTAAGTGCTTAATTTCAATATTTAAATTTTAGATTGTTGTTTTTTGTAATCTTTAGGATAATTTTTAGAATAAATACATTGTTTAGAGAATCCGACGAATAAAAAGAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3