SE0630020

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10998
  • Thellungiella halophila
  • SE0630020
  • hAT
  • Hat8
  • scaffold_7:1803709-1803876
  • TCTCTGTG
  • GCAGGGCCGGATCTGGGGACAGCCTGA

Secondary structure and sequence

TSD    TIR
5'



3' 
TCTCTGT                   -----C   CT  ------------     CATCCGTCTATAGCACCCAAAATTTTTCTTTGGTTA
       GCAGGGCCGGATCTGGGGA      AGC  GA            TGAAA                                    
       |||||||||||||||||||      |||  ||            |||||                                    T
       TGTCCCGGCCTAGACTCTT      TCG  CT            TGTTT                                    
GTGTCTC                   AAACCC   AT  TTGTTAAATTCT     ATATAAAAACACTAAACCCCCGACTTTTTAAGCATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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