SE0630027

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11005
  • Thellungiella halophila
  • SE0630027
  • hAT
  • Hat9
  • scaffold_6:2674812-2674984
  • GTCTTCTT
  • TCAGTGGCGGAGCCA

Secondary structure and sequence

TSD    TIR
5'



3' 
GTCTTCT               ------   GCATTAGCATGGGGTTATTCGCCCCCAACCAATTTTCAAAACTTGGTGTAATTTAGTA
       TCAGTGGCGGAGCCA      CAT                                                          
       |||||||||||||||      |||                                                          G
       GGTCACCGCCTCGGT      AGA                                                          
TTCTTCT               TTTTAA   AACTGATCTCCGTATATTTTCATATTTATTAAATTATTTATCCCCGTAATTGTCTTGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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