SE0630041

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11019
  • Thellungiella halophila
  • SE0630041
  • hAT
  • Hat12
  • scaffold_5:12486648-12486832
  • CCCATATG
  • CATATGCAGAGCCGGCCTTGAGC

Secondary structure and sequence

TSD    TIR
5'



3' 
CC     --                  CAA    ACCAAGCTGTTTGCGGCCCTTATTTTTACATAAAAAATTTTGAAAACAAAACAGCCAATTTT
  CATAT  GCAGAGCCGGCCTTGAGC   GCAA                                                              
  |||||  ||||||||||||||||||   ||||                                                               
  GTATA  CGTCTCGGCCGGGACTTG   ACGT                                                              
       CC                  ---    ATAAAAAACGTAACCGGTGTTCGATATCTCTTTTTTACCCGACAAAACGTATAAAAAAAGTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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