SE0610066

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11044
  • Thellungiella halophila
  • SE0610066
  • Tc1/Mariner
  • St1
  • scaffold_19:2738400-2738645
  • TA
  • TCCCTCCGTTTCATAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TAC                 ----------------------------        TTCTGACATTTTTCACACATATTAAGAAAATTATTAAAGTACAATTTTATCCCTTATTAATACATTAAATAATTTGTTTTT
   TCCCTCCGTTTCATAAA                            AAATGTTA                                                                                 
   |||||||||||||||||                            ||||||||                                                                                  
   AGGGAGGCAAAGTGTTT                            AAGTGTTT                                                                                 
ATA                 CTCACAGCAAAATTCCAAAATAAAAACA        CTCACAGCAAAATATAAAAGTTACGTTTTAAAATTTGTTATAAGGTCAAAATTGGTATAATTAAATTACATAAATAATCTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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