SE0630070

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11048
  • Thellungiella halophila
  • SE0630070
  • hAT
  • Hat9
  • scaffold_8:4915871-4916045
  • TGGGCTAC
  • TGGGCTACCAGTGGCGGAGCCA

Secondary structure and sequence

TSD    TIR
5'



3' 
    G    C             GAAT     TTGACTGGGGGCATATAGAAATATATATAATTTAATAAATGGAGGCATTAATATTGAA
 TGG CTAC AGTGGCGGAGCCA    TGTTT                                                          
 ||| |||| |||||||||||||    |||||                                                          C
 ATC GGTG TCACCGCCTCGGT    GTACG                                                          
C   G    -             ----     TAATCGTACCCCAGTAAGCGGGGGTTGGTTAAAAGTTTTCAACTACATTAAATCATCA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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