SE0630088

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11066
  • Thellungiella halophila
  • SE0630088
  • hAT
  • Hat4
  • scaffold_3:6826202-6826404
  • TCTAGTTC
  • CTAGTTCCAGTGGCGGAGC

Secondary structure and sequence

TSD    TIR
5'



3' 
  T    TTC           - -----TAC       AAGAAGGGGCAGTTGCCCCCGATAAAATTTGTTAGATTAGTGCAAATTTATTAAACCATTAAATAAAT
   CTAG   CAGTGGCGGAG C        TTGCACT                                                                    
   ||||   ||||||||||| |        |||||||                                                                    G
   GATC   GTCACCGCCTC G        AAAAATG                                                                    
CTT    --T           C TCTTCTAA       ACCCCGTTTTTAATTATAACAATTTTATTATACCAATACCCCCATTTTTTTTGTTAATACTCACCCCC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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