SE3730302

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11370
  • Solanum lycopersicum
  • SE3730302
  • hAT
  • Hat8
  • SL2.40ch10:1033863-1034046
  • GTTCTGGA
  • TGGACAGAGGCGGAGT

Secondary structure and sequence

TSD    TIR
5'



3' 
GTTC     -  A        CA T ----     AATAAGGAGATTCAAAATGTGTAGAAATAGATAGCCGAAGGGTGTTCGACATCTACTATA
    TGGAC AG GGCGGAGT  G A    TTTTC                                                            
    ||||| || ||||||||  | |    |||||                                                            T
    ACTTG TC CCGCCTCA  G G    TACTT                                                            
 GGT     G  C        AT - AACA     TCCCCAAGTAGCCGCCTTTTAATATAATAAATATGTACCAATTTTATTCAAATATACATA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3