SE3740520

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11588
  • Solanum lycopersicum
  • SE3740520
  • CACTA
  • Ca3
  • SL2.40ch04:56559468-56559610
  • TAC
  • CACTACAAGAAAAGAGTGAATTACATGAGGATTTTCTTAGGGATTAGTATTAAAATTTGCAGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TAC              A            A                  G   T            AAAAT
   CACTACAAGAAAAG GTGAATTACATG GGATTTTCTTAGGGATTA TAT AAAATTTGCAGG     
   |||||||||||||| |||||||||||| |||||||||||||||||| ||| ||||||||||||     A
   GTGATGTTCTTTTC CACTTAATGTAC TCTAAAAGAATCCCTAAT ATA TTTTAGACGTCC     
CAT              A            C                  G   C            ATTGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3