SE3740532

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11600
  • Solanum lycopersicum
  • SE3740532
  • CACTA
  • Ca6
  • SL2.40ch12:26522777-26522933
  • TTA
  • ACTACTAAAATAACTACATTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAC          -T    AC     ------    -   ACATCATCGCTTGTCTGTTTCTATTTTGCTCGTTGCTAACA
    ACTACTAAAA  AACT  ATTTT      GCGA TGA                                         
    ||||||||||  ||||  |||||      |||| |||                                         A
    TGATGATTTT  TTGA  TAAAA      ACAA GAT                                         
ATTA          TT    AC     TCAAAA    C   TTCTTGTTTAAAGCAACGATTTGGGTGAATCGCTGACCAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3