SE0830033

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11662
  • Thellungiella salsuginea
  • SE0830033
  • hAT
  • Hat7
  • Scaffold_6117:49793-50046
  • GTAGTTTG
  • CAGGGCCGGCCC

Secondary structure and sequence

TSD    TIR
5'



3' 
GTAGTTTG            ----        -   CTACCTAAAGCAAAAAAACAAAAATCTTAGCCCATTATTAAAAAAGATACAAAATATACCTTTATCTATACTCGAACTTGGGTGCCACTATAT
        CAGGGCCGGCCC    AATGGGTT TTG                                                                                             
        ||||||||||||    |||||||| |||                                                                                             T
        GTCCCGGCCGGG    GATTTCGT CAC                                                                                             
GTTTGATG            ACTC        C   TTCGTGAACGAAGTCCCGCCGTTCTTTATTTATTTTCAAATCCCGCGGTTAAAGACTTTCAAACAACATCACATCACCGTTTTGTAATTAAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3