SE0810036

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11665
  • Thellungiella salsuginea
  • SE0810036
  • Tc1/Mariner
  • St1
  • Scaffold_13022:22033-22278
  • TA
  • TACTCCCTCCGTTTCACAAAGAGTGTCGTTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
                                AAGGTTTTATT -    TTCACAAAGAGTGTCGTTTTATATTTTCAATGCAGAATTTTAAACAATATTCCAGTTTTGACCTCATTGATTTAATATAT
TACTCCCTCCGTTTCACAAAGAGTGTCGTTTT           T TTGT                                                                                
||||||||||||||||||||||||||||||||           | ||||                                                                                 
ATGAGGGAGGCAAAGTGTTTCTCACAGTAAGA           C GTAA                                                                                
                                ----------- T    AAGCTGTGAATAATTCTTTTGATAATTTTTATGATGAAACAGGAAGTAATTATGTAATTTATTAAAAAAAAGAAATTGAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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