SE0810045

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11674
  • Thellungiella salsuginea
  • SE0810045
  • Tc1/Mariner
  • St3
  • Scaffold_13048:36249-36524
  • TA
  • TACTCCCTCTGTTTTATAATAGTTGATTTTCTGAA

Secondary structure and sequence

TSD    TIR
5'



3' 
                              C    ATATTGCACAC   T      -- CA    GGACTCAATTATTTTTTTATTTTATTTTTTAGATTAGTTTACTTTAAAATTAATTTATTATTTTAATTAATATTACTTT
TACTCCCTCTGTTTTATAATAGTTGATTTT TGAA           AGA TAAGAA  A  ATAA                                                                               
|||||||||||||||||||||||||||||| ||||           ||| ||||||  |  ||||                                                                                
ATGAGGGAGACAAAGTATTATCAACTAAAA ACTT           AAA AGAACA  G  TGTT                                                                               
                              A    --------AAA   A      AA --    ATAAACTAAAGAACACACATTAATTATGTACAAACAAACATTAATTACGTACAAAGGTAAAAAATAACCACCTGTTCTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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