SE0830058

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11687
  • Thellungiella salsuginea
  • SE0830058
  • hAT
  • Hat1
  • Scaffold_3914:233313-233613
  • CGTATAAG
  • TATAAGCAGAGTCGTGCCTGA

Secondary structure and sequence

TSD    TIR
5'



3' 
CG    A            C   AA    -  TAATTACAAATGAGAAAAAAAAATTAGCCCCTTAAAACTTTTTTAATGCAGCTTAATCTATAAATAATTGGCAAAAAAAAGAAAAAATGACATATACATTTGGGAAGAATTGAACCCAA
  TATA GCAGAGTCGTGC TGA  TTTC TT                                                                                                                       
  |||| |||||||||||| |||  |||| ||                                                                                                                       G
  ATAT CGTCTCGGCACG ATT  GTGT CG                                                                                                                       
GA    G            T   -C    C  ATTACTTCGTACACAAAGTCCCGGCCTCCTTAATTTATAAAAAAACCCCAGTTAAAAGATCTTAACCTCAATCAGGTTTACCAAACACTATCCACTTTCGTTCAAATCAATTTTCAAAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3