SE0830061

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11690
  • Thellungiella salsuginea
  • SE0830061
  • hAT
  • Hat9
  • Scaffold_2171:35660-35867
  • CTTACAGC
  • AGCCAGTGGCGGA

Secondary structure and sequence

TSD    TIR
5'



3' 
 CTTAC   C              AAAAAAAATTACAGGGTCAGTTTTAATTTACAGTGTATTCTGAGCAAATTTTACGGGGTCATTTAGCTAAATTATTAATGT
      AGC AGTGGCGGAGCTAG                                                                                 
      ||| ||||||||||||||                                                                                  
      TCG TCACCGCCTCCGTC                                                                                 
CGACAT   -              GTACGACGGTCCACCCAGTAAACTGGGTACACCTTAATAAAAAAAAATATACAAGAATAAAAAATTTTATTTTATCCATTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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