SE1220009

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11732
  • Citrullus lanatus
  • SE1220009
  • Mutator
  • M2
  • scaffold56:2048089-2048325
  • ATTATCAAA
  • A

Secondary structure and sequence

TSD    TIR
5'



3' 
ATTATCAAAGAAAAATTATTATAA     -   AATATCAAACTATCTACAAATATAGAAAAATTTCACTATCTATCAGTGATAGATCACGATATACTTCTATTACTTGAGTGATAGAAGTCTATCGCTCA
                        ATAGA AAA                                                                                                  
                        ||||| |||                                                                                                   
                        AAACT TTA                                                                                                  
                             A   CCTGATAAAAGTTTATATCTTTTTACTCAGTTTGATAAATGTTTATATCTTTTTAAAGTGACAGATAATAACTATCTGATACTATCTAAAGAGAGCGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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