SE1220014

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11737
  • Citrullus lanatus
  • SE1220014
  • Mutator
  • M1
  • scaffold33:2430020-2430227
  • TTAAAAATA
  • AGGG

Secondary structure and sequence

TSD    TIR
5'



3' 
 TTAAAAAT    ----   TTTTCAGATATAGAAAAATGAACAAAAATATTTACAAATATAACAAAGTTTTATTGTCTATTTGCAATAGACCGCGAGATAGACAC
         AGGG    CTG                                                                                      
         ||||    |||                                                                                      A
         TCCC    GTA                                                                                      
AATAAAAAT    TTTA   AAATTTACCGTTTTAACGAATTTTATAAATGTTTATTATCGTTTTATAGTGTCAGATAGACACTATCTAGCGCTATCTGATGATAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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