SE1220015

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11738
  • Citrullus lanatus
  • SE1220015
  • Mutator
  • M2
  • scaffold776:527879-528046
  • TTATAACTT
  • TTATA

Secondary structure and sequence

TSD    TIR
5'



3' 
         AC      AATTATCTCAAATGGCAAATCTGCTGAAAATATTTACAATTAATAGAAAAATACACAATCTATCGTTGT
    TTATA  TTGAGA                                                                     
    |||||  ||||||                                                                      
    AATAT  CCGAAA                                                                     
TTTC     CC      AGAGTTTATATTCTTTTACTTGGTTTAATAAATGTTTATATCGTTTTAAAATGATAGATAGACACTATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3